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Bioinformatics Research Laboratory Core Publications

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Host Response to Probiotics Determined by Nutritional Status of Rotavirus-Infected Neonatal Mice. Preidis GA, Saulnier DM, Blutt SE, Mistretta TA, Riehle KP, Major AM, Venable SF, Barrish JP, Finegold MJ, Petrosino JF, Guerrant RL, Conner ME, Versalovic J.
J Pediatr Gastroenterol Nutr. 2012 Sep;55(3): 299-307.

The Genboree Microbiome Toolset and the analysis of 16S rRNA microbial sequences. Riehle K, Coarfa C, Jackson A, Ma J, Tandon A, Paithankar S, Raghuraman S, Mistretta TA, Saulnier D, Raza S, Diaz MA, Shulman R, Aagaard K, Versalovic J, Milosavljevic A.
BMC Bioinformatics. 2012; Aug; 13 (Suppl 13): S11”.

A metagenomic approach to characterization of the vaginal microbiome signature in pregnancy. Aagaard K, Riehle K, Ma J, Segata N, Mistretta TA, Coarfa C, Raza S, Rosenbaum S, Van den Veyver I, Milosavljevic A, Gevers D, Huttenhower C, Petrosino J, Versalovic J.
PLoS One. 2012;7(6):e36466. Epub 2012 Jun 13.

Probiotics stimulate enterocyte migration and microbial diversity in the neonatal mouse intestine. Preidis GA, Saulnier DM, Blutt SE, Mistretta TA, Riehle KP, Major AM, Venable SF, Finegold MJ, Petrosino JF, Conner ME, Versalovic J.
FASEB J. 2012 May;26(5):1960-9. Epub 2012 Jan 20.

Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome. Saulnier DM, Riehle K, Mistretta TA, Diaz MA, Mandal D, Raza S, Weidler EM, Qin X, Coarfa C, Milosavljevic A, Petrosino JF, Highlander S, Gibbs R, Lynch SV, Shulman RJ, Versalovic J.
Gastroenterology. 2011 Nov;141(5):1782-91. Epub 2011 Jul 8.

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